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Anaconda Cheat Sheet
conda info
Verify conda is installed, check version number
conda update conda
Update conda to the current version
conda install PACKAGENAME
Install a package included in Anaconda
spyder
Run a package after install, example Spyder
conda update PACKAGENAME
Update any installed program
COMMANDNAME --help
Command line help
conda install --help
Command line help
conda create --name py35 python=3.5
Create a new environment named py35, install Python 3.5
WINDOWS: activate py35
Activate the new environment to use it
LINUX, macOS: source activate py35
Activate the new environment to use it
conda env list
Get a list of all my environments, active environment is shown with *
conda create --clone py35 --name py35-2
Make exact copy of an environment
conda list
List all packages and versions installed in active environment
conda list --revisions
List the history of each change to the current environment
conda install --revision 2
Restore environment to a previous revision
conda list --explicit > bio-env.txt
Save environment to a text file
conda env remove --name bio-env
Delete an environment and everything in it
WINDOWS: deactivate
Deactivate the current environment
macOS, LINUX: source deactivate
Deactivate the current environment
conda env create --file bio-env.txt
Create environment from a text file
conda create --name bio-env biopython
Stack commands: create a new environment, name it bio-env and install the biopython package
conda search PACKAGENAME
Use conda to search for a package
https://docs.anaconda.com/anaconda/packages/pkg-docs/
Use conda to search for a package
conda install jupyter
Install a new package (Jupyter Notebook) in the active environment
jupyter-notebook
Run an installed package (Jupyter Notebook)
conda install --name bio-env toolz
Install a new package (toolz) in a different environment (bio-env)
conda update scikit-learn
Update a package in the current environment
conda install --channel conda-forge boltons
Install a package (boltons) from a specific channel (conda-forge)
pip install boltons
Install a package directly from PyPI into the current active environment using pip
conda remove --name bio-env toolz boltons
Remove one or more packages (toolz, boltons) from a specific environment (bio-env)